Quantcast
Channel: Are my PCA groups significantly different? - Cross Validated
Viewing all articles
Browse latest Browse all 2

Are my PCA groups significantly different?

$
0
0

I am studying the feeding behaviour of deep sea fishes, and have produced a dataset containing percentages for 20 different fatty acids (totalling 100%) for 32 individual fish. I have performed PCA (see below) and the data seems to group into 3 distinct groups, which correlates to the species of fish. Now I want to test the hypothosis that there is a significant difference between the 3 groups. I tried performing a MANOVA, but discovered in the process that my data is not normally distributed:

Shapiro-Wilk normality testdata: norm_testW = 0.62718, p-value < 2.2e-16

So, now I hope some of you can give your recommendations as to which test/tests to perform to determine whether the groups are significantly different or not. I would also appreciate suggestions to how to present my results, and additional work I can pursue to maximize the information contained in the data.

Here is an example of what my dataset looks like:

enter image description here

enter image description here

Thank you for your time!

/Kristian


Viewing all articles
Browse latest Browse all 2

Latest Images

Trending Articles



Latest Images

<script src="https://jsc.adskeeper.com/r/s/rssing.com.1596347.js" async> </script>
<script src="https://jsc.adskeeper.com/r/s/rssing.com.1596344.js" async> </script>